Welcome to the DNA Scout Wiki Page

Project Description
A tool to search a DNA strand of {ACTG} characters for matches against a specified substring, calculate distances between matching substrings (span), and also generate lists of all unique/redundant strands in the file.
http://web.pdx.edu/~bdelgado/dnascout


7/5/2009 Meeting: Data Structure optimization discussion

*Agenda:
1.What graphing program to use
2.optimization alternatives for existing code (is it possible to use memory more efficiently for the data structures?)
3.Explore the possibility of imploring the use of threads/signals/processes for a parallelized search

Last edited Jul 6, 2009 at 5:40 AM by bdelgado, version 6